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    ubald1b UBA-like domain containing 1b [ Danio rerio (zebrafish) ]

    Gene ID: 553697, updated on 27-Mar-2024

    Summary

    Official Symbol
    ubald1bprovided by ZNC
    Official Full Name
    UBA-like domain containing 1bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050522-446
    See related
    Ensembl:ENSDARG00000020976 AllianceGenome:ZFIN:ZDB-GENE-050522-446
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fam100ab; zgc:112270; zgc:136362
    Summary
    Orthologous to human UBALD1 (UBA like domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    NEW
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    Genomic context

    See ubald1b in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (54836428..54846408, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (54581826..54591806, complement)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene si:ch211-74m13.1 Neighboring gene vascular cell adhesion protein 1-like Neighboring gene mahogunin, ring finger 1b Neighboring gene arylalkylamine N-acetyltransferase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC112270, MGC136362

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    UBA-like domain-containing protein 1b
    Names
    family with sequence similarity 100, member Ab

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001020671.2NP_001018507.2  UBA-like domain-containing protein 1b

      See identical proteins and their annotated locations for NP_001018507.2

      Status: PROVISIONAL

      Source sequence(s)
      BC116518
      UniProtKB/TrEMBL
      Q1JQ18
      Related
      ENSDARP00000068499.4, ENSDART00000074010.6
      Conserved Domains (1) summary
      cd14343
      Location:644
      UBA_F100B_like; UBA-like domain found in protein FAM100B

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      54836428..54846408 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)