nob1 NIN1 (RPN12) binding protein 1 homolog [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nob1provided by ZNC
Official Full Name: NIN1 (RPN12) binding protein 1 homologprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-3112
See related: Ensembl:ENSDARG00000016080 AllianceGenome:ZFIN:ZDB-GENE-030131-3112
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: Nob1p; fc27e05; wu:fc27e05; si:ch73-167i17.3
Summary: Predicted to enable endoribonuclease activity. Predicted to be involved in maturation of SSU-rRNA. Predicted to act upstream of or within cleavage involved in rRNA processing and ribosomal small subunit biogenesis. Predicted to be located in nucleus. Predicted to be part of preribosome, small subunit precursor. Orthologous to human NOB1 (NIN1 (RPN12) binding protein 1 homolog). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	18	NC_007129.7 (5860217..5875241, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	18	NC_007129.6 (5245302..5260449, complement)

Chromosome 18 - NC_007129.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables RNA endonuclease activity	IBA Inferred from Biological aspect of Ancestor more info
enables RNA endonuclease activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables nuclease activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in maturation of SSU-rRNA	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within ribosomal small subunit biogenesis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of preribosome, small subunit precursor	IBA Inferred from Biological aspect of Ancestor more info

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The following sections contain reference sequences that belong to a specific genome build. Explain