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    fam219b family with sequence similarity 219 member B [ Danio rerio (zebrafish) ]

    Gene ID: 541542, updated on 27-Mar-2024

    Summary

    Official Symbol
    fam219bprovided by ZNC
    Official Full Name
    family with sequence similarity 219 member Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050327-82
    See related
    Ensembl:ENSDARG00000104637 AllianceGenome:ZFIN:ZDB-GENE-050327-82
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:113258
    Summary
    Orthologous to human FAM219B (family with sequence similarity 219 member B). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See fam219b in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (814286..824968)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (879777..890543, complement)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene ribonuclease P and MRP subunit p25, b Neighboring gene cytochrome c oxidase subunit 5Ab Neighboring gene si:dkey-205h23.1 Neighboring gene poly (ADP-ribose) polymerase family, member 6a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014356.1NP_001014378.1  protein FAM219B

      See identical proteins and their annotated locations for NP_001014378.1

      Status: PROVISIONAL

      Source sequence(s)
      BC091881
      UniProtKB/TrEMBL
      A0A8M1N4T3, Q58EI9
      Related
      ENSDARP00000148525.1, ENSDART00000184489.1
      Conserved Domains (1) summary
      pfam15260
      Location:57176
      FAM219A; Protein family FAM219A

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      814286..824968
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017351920.2XP_017207409.1  protein FAM219B isoform X1

      UniProtKB/TrEMBL
      A0A2R8Q6A6, A0A8M6YTG7
      Related
      ENSDARP00000140070.1, ENSDART00000157801.2