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    Ankrd24 ankyrin repeat domain 24 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 299639, updated on 5-Mar-2024

    Summary

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    Symbol
    Ankrd24provided by RGD
    Full Name
    ankyrin repeat domain 24provided by RGD
    Primary source
    RGD:1311385
    See related
    Ensembl:ENSRNOG00000006759 AllianceGenome:RGD:1311385
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human ANKRD24 (ankyrin repeat domain 24). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Adrenal (RPKM 19.3), Brain (RPKM 16.0) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Ankrd24 in Genome Data Viewer
    Location:
    7q11
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (8712720..8731910, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (8061634..8081142, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (10917359..10937522, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130046242 Neighboring gene zinc finger protein 57 like Neighboring gene uncharacterized LOC102551996 Neighboring gene sirtuin 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in auditory receptor cell stereocilium organization ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in sensory perception of sound ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in stereocilium ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 24
    Names
    ankyrin repeat domain-containing protein 24-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106771.1 → NP_001100241.1  ankyrin repeat domain-containing protein 24

      See identical proteins and their annotated locations for NP_001100241.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474029
      UniProtKB/TrEMBL
      A6K857, A6K858, D3ZCC5
      Related
      ENSRNOP00000008882.5, ENSRNOT00000008882.7
      Conserved Domains (5) summary
      cd00204
      Location:81 → 205
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:90 → 182
      Ank_2; Ankyrin repeats (3 copies)
      pfam13830
      Location:730 → 815
      DUF4192; Domain of unknown function (DUF4192)
      pfam13857
      Location:170 → 221
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      8712720..8731910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063263189.1 → XP_063119259.1  ankyrin repeat domain-containing protein 24 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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