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    SNORD61 small nucleolar RNA, C/D box 61 [ Homo sapiens (human) ]

    Gene ID: 26787, updated on 17-Jun-2024

    Summary

    Official Symbol
    SNORD61provided by HGNC
    Official Full Name
    small nucleolar RNA, C/D box 61provided by HGNC
    Primary source
    HGNC:HGNC:10218
    See related
    Ensembl:ENSG00000206979 AllianceGenome:HGNC:10218
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U61; RNU61; HBII-342
    Summary
    Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box C/D class snoRNAs are involved in site-specific 2-prime-O-ribose methylation of preribosomal RNA precursors. This snoRNA is located in an intron of the RNA binding motif protein, X-linked gene (RBMX). [provided by RefSeq, Sep 2009]
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    Genomic context

    See SNORD61 in Genome Data Viewer
    Location:
    Xq26.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (136879199..136879271, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (135187926..135187998, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (135961358..135961430, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene RAN pseudogene 4 Neighboring gene NANOG hESC enhancer GRCh37_chrX:135916870-135917371 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29997 Neighboring gene RAB28, member RAS oncogene family pseudogene 5 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:135956167-135957366 Neighboring gene H3K27ac hESC enhancers GRCh37_chrX:135961809-135962408 and GRCh37_chrX:135962409-135963007 Neighboring gene RNA binding motif protein X-linked Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30000 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30001 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30002 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30003 Neighboring gene ribosomal protein L22 pseudogene 23 Neighboring gene transmembrane 9 superfamily member 5, pseudogene Neighboring gene serine/arginine repetitive matrix 1 pseudogene 3

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • RNA, U61 small nuclear

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002735.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      X96661
      Related
      ENST00000384252.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      136879199..136879271 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      135187926..135187998 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)