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    SYNPO2 synaptopodin 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704894, updated on 5-Mar-2024

    Summary

    Official Symbol
    SYNPO2provided by VGNC
    Official Full Name
    synaptopodin 2provided by VGNC
    Primary source
    VGNC:VGNC:78152
    See related
    Ensembl:ENSMMUG00000008702
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See SYNPO2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (116951439..117123713)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (117878108..118052865)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit Neighboring gene SEC24 homolog D, COPII coat complex component Neighboring gene uncharacterized LOC106998476 Neighboring gene myozenin 2 Neighboring gene ubiquitin specific peptidase 53

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Z disc IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      116951439..117123713
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139138.2XP_014994624.1  synaptopodin-2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QJ87
      Conserved Domains (1) summary
      cd00992
      Location:785
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    2. XM_015139136.2XP_014994622.2  synaptopodin-2 isoform X1

      UniProtKB/TrEMBL
      F7E206, I0FG46
      Related
      ENSMMUP00000011410.4, ENSMMUT00000012163.4
      Conserved Domains (2) summary
      PHA03247
      Location:5931064
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:785
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    3. XM_015139137.2XP_014994623.2  synaptopodin-2 isoform X3

      UniProtKB/TrEMBL
      I0FG45
      Conserved Domains (2) summary
      PHA03247
      Location:5931064
      PHA03247; large tegument protein UL36; Provisional
      cd00992
      Location:785
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    RNA

    1. XR_003729764.1 RNA Sequence