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    LOC100505498 uncharacterized LOC100505498 [ Homo sapiens (human) ]

    Gene ID: 100505498, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC100505498
    Gene description
    uncharacterized LOC100505498
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC100505498 in Genome Data Viewer
    Location:
    2q22.3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (145006401..145264110)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (145454415..145712150)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene testis expressed 41 Neighboring gene uncharacterized LOC105373663 Neighboring gene long intergenic non-protein coding RNA 1966 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:145764403-145765602 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16606 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16607 Neighboring gene ribosomal protein L6 pseudogene 5 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:146248222-146248369 Neighboring gene uncharacterized LOC105373664

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. The human cytoplasmic dynein interactome reveals novel activators of motility. Redwine WB, et al. Elife, 2017 Jul 18. PMID 28718761, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Clone Names

    • AC074093.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      145006401..145264110
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_923410.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      145454415..145712150
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007072523.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Chemical Information
    Molecular Biology Databases