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    LINC01230 long intergenic non-protein coding RNA 1230 [ Homo sapiens (human) ]

    Gene ID: 102800446, updated on 17-Jun-2024

    Summary

    Official Symbol
    LINC01230provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1230provided by HGNC
    Primary source
    HGNC:HGNC:49686
    See related
    AllianceGenome:HGNC:49686
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    lnc-DRMT2; linc-DMRT2; TCONS_00015639
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    Genomic context

    See LINC01230 in Genome Data Viewer
    Location:
    9p24.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (1048143..1048641)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (1049812..1050310)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (1048143..1048641)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 1073, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19727 Neighboring gene H3 histone pseudogene 29 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:1046691-1047556 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:1047960-1048147 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:1050129-1050998 Neighboring gene doublesex and mab-3 related transcription factor 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:1083793-1084293 Neighboring gene RPS27A pseudogene 14

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110643.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL358976

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      1048143..1048641
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      1049812..1050310
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)