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    ZK688.9 TIP41-like protein [ Caenorhabditis elegans ]

    Gene ID: 176106, updated on 12-Jun-2024

    Summary

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    Gene symbol
    ZK688.9
    Gene description
    TIP41-like protein
    Locus tag
    CELE_ZK688.9
    See related
    AllianceGenome:WB:WBGene00022803
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in TOR signaling and regulation of phosphoprotein phosphatase activity. Predicted to be active in cytosol. Orthologous to human TIPRL (TOR signaling pathway regulator). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ZK688.9 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (7881113..7883000, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Acetylcholine receptor-like protein cup-4 Neighboring gene Putative tyrosinase-like protein tyr-1 Neighboring gene Iodotyrosine dehalogenase 1 homolog Neighboring gene Transmembrane protein Neighboring gene Ubiquitin-like domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in TOR signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of phosphoprotein phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of phosphoprotein phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    TIP41-like protein
    NP_498713.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      7881113..7883000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066312.8 → NP_498713.3  TIP41-like protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498713.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34274, Q27GV5, Q95PW4
      Conserved Domains (1) summary
      pfam04176
      Location:87 → 239
      TIP41; TIP41-like family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34274.3

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