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    ndufa5 NADH:ubiquinone oxidoreductase subunit A5 [ Danio rerio (zebrafish) ]

    Gene ID: 541328, updated on 27-Mar-2024

    Summary

    Official Symbol
    ndufa5provided by ZNC
    Official Full Name
    NADH:ubiquinone oxidoreductase subunit A5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050320-17
    See related
    Ensembl:ENSDARG00000039346 AllianceGenome:ZFIN:ZDB-GENE-050320-17
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:114172
    Summary
    Predicted to be involved in respiratory electron transport chain. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human NDUFA5 (NADH:ubiquinone oxidoreductase subunit A5). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See ndufa5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (4930406..4932578, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (4921836..4924008, complement)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103910383 Neighboring gene solute carrier family 13 member 4 Neighboring gene protein tyrosine phosphatase receptor type Z1b Neighboring gene cytochrome c oxidase assembly factor 6 Neighboring gene uncharacterized LOC110439413 Neighboring gene uncharacterized LOC110439422

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in respiratory electron transport chain IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within respiratory electron transport chain IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mitochondrial respiratory chain complex I IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
    Names
    NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
    NP_001013474.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013456.1NP_001013474.1  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5

      See identical proteins and their annotated locations for NP_001013474.1

      Status: PROVISIONAL

      Source sequence(s)
      BC091561
      UniProtKB/TrEMBL
      A0A8M1N4F5, Q5BJA2
      Related
      ENSDARP00000094070.3, ENSDART00000103293.4
      Conserved Domains (1) summary
      pfam04716
      Location:1973
      ETC_C1_NDUFA5; ETC complex I subunit conserved region

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      4930406..4932578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)