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    OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA [ Homo sapiens (human) ]

    Gene ID: 90271, updated on 10-Oct-2023

    Summary

    Official Symbol
    OLMALINCprovided by HGNC
    Official Full Name
    oligodendrocyte maturation-associated long intergenic non-coding RNAprovided by HGNC
    Primary source
    HGNC:HGNC:28060
    See related
    Ensembl:ENSG00000235823 MIM:616240; AllianceGenome:HGNC:28060
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C10orf75; HI-LNC80; LINC00263; NCRNA00263; OLMALINCAS
    Expression
    Ubiquitous expression in brain (RPKM 10.8), ovary (RPKM 8.8) and 24 other tissues See more
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    Genomic context

    See OLMALINC in Genome Data Viewer
    Location:
    10q24.31
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (100373576..100388354)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (101257807..101272632)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (102133333..102148111)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene polycystin 2 like 1, transient receptor potential cation channel Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3887 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3888 Neighboring gene Sharpr-MPRA regulatory region 15237 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:102106425-102107016 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:102114334-102114834 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102132955-102133524 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102133525-102134092 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102134093-102134662 Neighboring gene stearoyl-CoA desaturase Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:102214151-102214652 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102242041-102242696 Neighboring gene VISTA enhancer hs1006 Neighboring gene Wnt family member 8B Neighboring gene SEC31 homolog B, COPII coat complex component Neighboring gene MPRA-validated peak1070 silencer

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Other Names

    • Human Islet Long Non Coding RNA 80
    • long intergenic non-protein coding RNA 263
    • oligodendrocyte maturation-associated long intervening non-coding RNA

    Clone Names

    • FLJ12974

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026762.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC045787, BC062533, CB159470
      Related
      ENST00000659159.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      100373576..100388354
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      101257807..101272632
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)