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    Spint1 serine protease inhibitor, Kunitz type 1 [ Mus musculus (house mouse) ]

    Gene ID: 20732, updated on 12-May-2024

    Summary

    Official Symbol
    Spint1provided by MGI
    Official Full Name
    serine protease inhibitor, Kunitz type 1provided by MGI
    Primary source
    MGI:MGI:1338033
    See related
    Ensembl:ENSMUSG00000027315 AllianceGenome:MGI:1338033
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    HAI-1
    Summary
    Predicted to enable serine-type endopeptidase inhibitor activity. Acts upstream of or within extracellular matrix organization; neural tube closure; and placenta development. Located in plasma membrane. Is expressed in several structures, including alimentary system; brain; extraembryonic component; genitourinary system; and sensory organ. Orthologous to human SPINT1 (serine peptidase inhibitor, Kunitz type 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in duodenum adult (RPKM 111.5), small intestine adult (RPKM 107.4) and 11 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Spint1 in Genome Data Viewer
    Location:
    2 E5; 2 59.97 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (119067841..119079995)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (119237360..119249535)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C17 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:119034498-119034685 Neighboring gene zinc finger, FYVE domain containing 19 Neighboring gene protein phosphatase 1, regulatory inhibitor subunit 14D Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:119076669-119076852 Neighboring gene STARR-seq mESC enhancer starr_05478 Neighboring gene ras homolog family member V Neighboring gene ribosomal protein S27 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables peptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables serine-type endopeptidase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables serine-type endopeptidase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    kunitz-type protease inhibitor 1
    Names
    hepatocyte growth factor activator inhibitor type 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001412660.1NP_001399589.1  kunitz-type protease inhibitor 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AL929318
      UniProtKB/Swiss-Prot
      Q99J04, Q9R097
      Related
      ENSMUSP00000106440.2, ENSMUST00000110816.8
    2. NM_001412661.1NP_001399590.1  kunitz-type protease inhibitor 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AL929318
      UniProtKB/Swiss-Prot
      Q99J04, Q9R097
      Related
      ENSMUSP00000106441.3, ENSMUST00000110817.3
    3. NM_016907.3NP_058603.2  kunitz-type protease inhibitor 1 precursor

      See identical proteins and their annotated locations for NP_058603.2

      Status: VALIDATED

      Source sequence(s)
      AL929318
      Consensus CDS
      CCDS16597.1
      UniProtKB/Swiss-Prot
      Q99J04, Q9R097
      UniProtKB/TrEMBL
      Q9D3K4
      Related
      ENSMUSP00000028783.8, ENSMUST00000028783.14
      Conserved Domains (3) summary
      smart00192
      Location:313344
      LDLa; Low-density lipoprotein receptor domain class A
      pfam00014
      Location:368419
      Kunitz_BPTI; Kunitz/Bovine pancreatic trypsin inhibitor domain
      pfam07502
      Location:42133
      MANEC; MANEC domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      119067841..119079995
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)