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    LOC101927093 uncharacterized LOC101927093 [ Homo sapiens (human) ]

    Gene ID: 101927093, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC101927093
    Gene description
    uncharacterized LOC101927093
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.3) See more
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    Genomic context

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    See LOC101927093 in Genome Data Viewer
    Location:
    17q11.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (30573471..30576504, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (31518114..31521147, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 29, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28892925-28893520 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28893521-28894115 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28896451-28897128 Neighboring gene SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28897129-28897806 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28898485-28899162 Neighboring gene keratin 17 pseudogene 3 Neighboring gene uncharacterized LOC124903978 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8398 Neighboring gene SMAD specific E3 ubiquitin protein ligase 2 pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      30573471..30576504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_243789.5 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      31518114..31521147 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007087359.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials