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    RPSAP15 ribosomal protein SA pseudogene 15 [ Homo sapiens (human) ]

    Gene ID: 220885, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RPSAP15provided by HGNC
    Official Full Name
    ribosomal protein SA pseudogene 15provided by HGNC
    Primary source
    HGNC:HGNC:31464
    See related
    Ensembl:ENSG00000237506 AllianceGenome:HGNC:31464
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LAMRL5; LAMR1P15; RPSA_25_1791
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    Genomic context

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    See RPSAP15 in Genome Data Viewer
    Location:
    Xq21.31
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (87703273..87704306, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (86130290..86131323, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (86958273..86959306, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905267 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:86520149-86521348 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:86771985-86772760 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:86772761-86773536 Neighboring gene kelch like family member 4 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:86934749-86935296 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:86941929-86942460 Neighboring gene MPRA-validated peak7403 silencer Neighboring gene uncharacterized LOC124905233 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:87033651-87034150 Neighboring gene RPL34 pseudogene 36

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning and characterization of a highly conserved human 67-kDa laminin receptor pseudogene mapping to Xq21.3. Richardson MP, et al. Gene, 1998 Jan 5. PMID 9461426
    2. Physical and transcriptional mapping of the X-linked cleft palate and ankyloglossia (CPX) critical region. Braybrook C, et al. Hum Genet, 2001 Jun. PMID 11499681
    3. Proteomic screen defines the hepatocyte nuclear factor 1alpha-binding partners and identifies HMGB1 as a new cofactor of HNF1alpha. Yu M, et al. Nucleic Acids Res, 2008 Mar. PMID 18160415, Free PMC Article
    4. Identification of novel Smad2 and Smad3 associated proteins in response to TGF-beta1. Brown KA, et al. J Cell Biochem, 2008 Oct 1. PMID 18729074, Free PMC Article
    5. Glutamine Triggers Acetylation-Dependent Degradation of Glutamine Synthetase via the Thalidomide Receptor Cereblon. Nguyen TV, et al. Mol Cell, 2016 Mar 17. PMID 26990986, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Other Names

    • laminin receptor 1 pseudogene 15
    • laminin receptor-like protein LAMRL5 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_011100.4 

      Range
      101..1134
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      87703273..87704306 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      86130290..86131323 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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