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    SNORD58C small nucleolar RNA, C/D box 58C [ Homo sapiens (human) ]

    Gene ID: 100124516, updated on 10-Oct-2023

    Summary

    Official Symbol
    SNORD58Cprovided by HGNC
    Official Full Name
    small nucleolar RNA, C/D box 58Cprovided by HGNC
    Primary source
    HGNC:HGNC:33613
    See related
    AllianceGenome:HGNC:33613
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U58
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    Genomic context

    See SNORD58C in Genome Data Viewer
    Location:
    18q21.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (49489235..49489324, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (49686976..49687065, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (47015605..47015694, complement)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene chromosome 18 open reading frame 32 Neighboring gene RPL17-C18orf32 readthrough Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9449 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13309 Neighboring gene microRNA 1539 Neighboring gene ribosomal protein L17 Neighboring gene small nucleolar RNA, C/D box 58A Neighboring gene small nucleolar RNA, C/D box 58B

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Other Names

    • SNORD58C snoRNA
    • U58 small nucleolar RNA
    • U58 snoRNA

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003701.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC100778

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      49489235..49489324 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      49686976..49687065 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)