cyc1.L cytochrome c-1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cyc1.L
Official Full Name: cytochrome c-1 L homeolog
Primary source: Xenbase:XB-GENE-6254224
Locus tag: XELAEV_18032494mg
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cyc1; uqcr4; cyc1-a; cyc1-b
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Genomic context

Location:: chromosome: 6L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (162155179..162160308, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (153008244..153013380, complement)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables electron transfer activity	IEA Inferred from Electronic Annotation more info
enables heme binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within mitochondrial electron transport, ubiquinol to cytochrome c	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info
part_of mitochondrial respiratory chain complex III	IEA Inferred from Electronic Annotation more info
located_in respirasome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cytochrome c-1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086910.1 → NP_001080379.1 cytochrome c-1 L homeolog

See identical proteins and their annotated locations for NP_001080379.1

Status: PROVISIONAL

Source sequence(s)

BC045127

UniProtKB/TrEMBL

A0A974CRH9, Q7ZX80

Conserved Domains (2) summary

COG2857
Location:49 → 299

CYT1; Cytochrome c1 [Energy production and conversion]

pfam02167
Location:80 → 298

Cytochrom_C1; Cytochrome C1 family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

162155179..162160308 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)