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    trac T cell receptor alpha constant [ Danio rerio (zebrafish) ]

    Gene ID: 368967, updated on 12-May-2024

    Summary

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    Official Symbol
    tracprovided by ZNC
    Official Full Name
    T cell receptor alpha constantprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030616-200
    See related
    AllianceGenome:ZFIN:ZDB-GENE-030616-200
    Gene type
    other
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    TCR1; TCRA3; TCRAC; TCR8RC; TCR-alpha; si:dz172d23.25; si:dz172d23.26; si:dz172d23.27; si:busm1-172d23.25; si:busm1-172d23.26; si:busm1-172d23.27
    Summary
    Is expressed in digestive system and immune system. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See trac in Genome Data Viewer
    Location:
    chromosome: 2
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (36092953..36178144)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (36110496..36195655)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene SMG7 nonsense mediated mRNA decay factor Neighboring gene T-cell receptor delta constant Neighboring gene Ig kappa chain V-VI region NQ6-8.3.1-like Neighboring gene Ig kappa chain V-VI region NQ2-6.1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. T cells and the thymus in developing zebrafish. Danilova N, et al. Dev Comp Immunol, 2004 Jun. PMID 15043944
    2. Allelic polymorphism of T-cell receptor constant domains is widespread in fishes. Criscitiello MF, et al. Immunogenetics, 2004 Mar. PMID 14985877
    3. System-wide Analysis of the T Cell Response. Covacu R, et al. Cell Rep, 2016 Mar 22. PMID 26972015, Free PMC Article
    4. Thymus development in the zebrafish (Danio rerio) from an ecoimmunology perspective. Kernen L, et al. J Exp Zool A Ecol Integr Physiol, 2020 Dec. PMID 33306886
    5. Specific resistance to Pseudomonas aeruginosa infection in zebrafish is mediated by the cystic fibrosis transmembrane conductance regulator. Phennicie RT, et al. Infect Immun, 2010 Nov. PMID 20732993, Free PMC Article

    See all (45) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • T-cell receptor alpha TCRa-L1
    • TCR alpha constant domain
    • constant region

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      36092953..36178144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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