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    zgc:194392 zgc:194392 [ Danio rerio (zebrafish) ]

    Gene ID: 798626, updated on 27-Mar-2024

    Summary

    Official Symbol
    zgc:194392provided by ZNC
    Official Full Name
    zgc:194392provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-4774
    See related
    Ensembl:ENSDARG00000074809 AllianceGenome:ZFIN:ZDB-GENE-030131-4774
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fd59g01; wu:fd59g01
    Summary
    Orthologous to human C1orf115 (chromosome 1 open reading frame 115). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See zgc:194392 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (30701423..30702383, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (30684460..30685420, complement)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene SH3 and SYLF domain containing 1 Neighboring gene ALK and LTK ligand 2b Neighboring gene apolipoprotein Ba Neighboring gene lipid droplet associated hydrolase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein C1orf115 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128802.1NP_001122274.1  uncharacterized protein C1orf115 homolog

      See identical proteins and their annotated locations for NP_001122274.1

      Status: PROVISIONAL

      Source sequence(s)
      BC162982
      UniProtKB/TrEMBL
      B3DI09, B3DI34, F6PBD3
      Related
      ENSDARP00000104364.2, ENSDART00000114358.4
      Conserved Domains (1) summary
      pfam15828
      Location:55130
      DUF4710; Domain of unknown function (DUF4710)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      30701423..30702383 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)