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    zpax4 zona pellucida protein AX 4 [ Danio rerio (zebrafish) ]

    Gene ID: 798996, updated on 27-Mar-2024

    Summary

    Official Symbol
    zpax4provided by ZNC
    Official Full Name
    zona pellucida protein AX 4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6199
    See related
    Ensembl:ENSDARG00000079034 AllianceGenome:ZFIN:ZDB-GENE-030131-6199
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fi33e12; fi38e01; wu:fi33e12; wu:fi38e01; si:dkey-19b23.11
    Orthologs
    NEW
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    Genomic context

    See zpax4 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (20577694..20582851, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (20325726..20330883, complement)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene zgc:158423 Neighboring gene si:dkey-19b23.10 Neighboring gene uncharacterized LOC108190658 Neighboring gene si:dkey-19b23.7 Neighboring gene si:dkey-19b23.8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    zona pellucida protein AX 4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001204179.1NP_001191108.1  zona pellucida protein AX 4 precursor

      Status: VALIDATED

      Source sequence(s)
      BI843123, BM775738, EG577874, EG586235, EV604559
      UniProtKB/TrEMBL
      A0A8M1NYL5, F1R4N4
      Related
      ENSDARP00000099884.2, ENSDART00000111719.4
      Conserved Domains (1) summary
      smart00241
      Location:643725
      ZP; Zona pellucida (ZP) domain

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      20577694..20582851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394685.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      189152..194309 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)