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    LOC389831 uncharacterized LOC389831 [ Homo sapiens (human) ]

    Gene ID: 389831, updated on 5-Mar-2024

    Summary

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    Gene symbol
    LOC389831
    Gene description
    uncharacterized LOC389831
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Orthologs
    all
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    Genomic context

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    See LOC389831 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Unplaced Scaffold NT_113901.1 (42938..86735, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (1909592..1953351)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 Unlocalized Scaffold NT_113901.1 (42938..86735, complement)

    NT_113901.1Genomic Context describing neighboring genes Neighboring gene C-terminal-binding protein 2-like Neighboring gene uncharacterized LOC105379275 Neighboring gene vomeronasal 1 receptor 44 pseudogene

    NW_021160013.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905468 Neighboring gene carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like Neighboring gene uncharacterized LOC124905469 Neighboring gene C-terminal-binding protein 2-like Neighboring gene uncharacterized LOC124905471

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Markers

    Homology

    Clone Names

    • FLJ23285

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_144628.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC011043, BF433147

    2. NR_187193.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      MG910336

    3. NR_187194.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      MG910336

    4. NR_187195.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      MG910336

    5. NR_187196.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      MG910336

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NT_113901.1 Reference GRCh38.p14 Primary Assembly

      Range
      42938..86735 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_009530076.1 RNA Sequence

    2. XR_009530074.1 RNA Sequence

    3. XR_009530071.1 RNA Sequence

    4. XR_009530072.1 RNA Sequence

    5. XR_009530073.1 RNA Sequence

    6. XR_009530070.1 RNA Sequence

    7. XR_009530075.1 RNA Sequence

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_021160013.1 Reference GRCh38.p14 PATCHES

      Range
      206505..250301
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_009530078.1 RNA Sequence

    2. XR_009530081.1 RNA Sequence

    3. XR_009530077.1 RNA Sequence

    4. XR_009530079.1 RNA Sequence

    5. XR_009530080.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      1909592..1953351
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001242480.3: Suppressed sequence

      Description
      NM_001242480.3: This RefSeq was removed because it is now thought that this gene does not encode a protein.

    2. NM_001347680.2: Suppressed sequence

      Description
      NM_001347680.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.

    3. NM_001347681.2: Suppressed sequence

      Description
      NM_001347681.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.

    4. NM_001347682.2: Suppressed sequence

      Description
      NM_001347682.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.
    Nucleotide Protein
    Heading Accession and Version

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