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    PLXNB1 plexin B1 [ Homo sapiens (human) ]

    Gene ID: 5364, updated on 11-Apr-2024

    Summary

    Official Symbol
    PLXNB1provided by HGNC
    Official Full Name
    plexin B1provided by HGNC
    Primary source
    HGNC:HGNC:9103
    See related
    Ensembl:ENSG00000164050 MIM:601053; AllianceGenome:HGNC:9103
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SEP; PLXN5; PLEXIN-B1
    Summary
    Enables semaphorin receptor activity. Involved in several processes, including negative regulation of cell adhesion; regulation of cell shape; and semaphorin-plexin signaling pathway. Is integral component of plasma membrane. Part of semaphorin receptor complex. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in skin (RPKM 13.8), kidney (RPKM 13.0) and 24 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See PLXNB1 in Genome Data Viewer
    Location:
    3p21.31
    Exon count:
    43
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (48403854..48430310, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (48431864..48458348, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (48445261..48471495, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene serine peptidase inhibitor Kazal type 8 (putative) Neighboring gene microRNA 2115 Neighboring gene MPRA-validated peak4639 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:48399605-48400105 Neighboring gene F-box and WD repeat domain containing 12 Neighboring gene RNA, 7SL, cytoplasmic 321, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14326 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14327 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:48471449-48472442 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:48473797-48474996 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:48476193-48477035 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14328 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14329 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19828 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14330 Neighboring gene coiled-coil domain containing 51 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14331 Neighboring gene ATRIP-TREX1 readthrough Neighboring gene translation machinery associated 7 homolog Neighboring gene ATR interacting protein Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19829 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:48507557-48508438 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:48508439-48509318 Neighboring gene three prime repair exonuclease 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • KIAA0407, MGC149167

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables GTPase activating protein binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables GTPase activator activity TAS
    Traceable Author Statement
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables semaphorin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables semaphorin receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables semaphorin receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables semaphorin receptor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables semaphorin receptor binding TAS
    Traceable Author Statement
    more info
    PubMed 
    enables transmembrane signaling receptor activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cell migration NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in inhibitory synapse assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in intracellular signal transduction NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in negative regulation of cell adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of cell adhesion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of osteoblast proliferation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in neuron projection morphogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in ossification involved in bone maturation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of GTPase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of Rho protein signal transduction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of axonogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of cell migration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of cell shape IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of cell shape IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of cytoskeleton organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in semaphorin-plexin signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in semaphorin-plexin signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
     
    part_of semaphorin receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of semaphorin receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of semaphorin receptor complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of semaphorin receptor complex TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    plexin-B1
    Names
    plexin 5
    semaphorin receptor SEP

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001130082.3NP_001123554.1  plexin-B1 precursor

      See identical proteins and their annotated locations for NP_001123554.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AB007867, AC134772, BC066773
      Consensus CDS
      CCDS2765.1
      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
      Related
      ENSP00000296440.6, ENST00000296440.11
      Conserved Domains (10) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      PHA03247
      Location:681839
      PHA03247; large tegument protein UL36; Provisional
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622102
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      pfam17960
      Location:541627
      TIG_plexin; TIG domain
      pfam18020
      Location:9211020
      TIG_2; TIG domain found in plexin
    2. NM_002673.6NP_002664.2  plexin-B1 precursor

      See identical proteins and their annotated locations for NP_002664.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AB007867, AC134772, BC066773
      Consensus CDS
      CCDS2765.1
      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
      Related
      ENSP00000351338.4, ENST00000358536.8
      Conserved Domains (10) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      PHA03247
      Location:681839
      PHA03247; large tegument protein UL36; Provisional
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622102
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      pfam17960
      Location:541627
      TIG_plexin; TIG domain
      pfam18020
      Location:9211020
      TIG_2; TIG domain found in plexin

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      48403854..48430310 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047448333.1XP_047304289.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    2. XM_011533835.2XP_011532137.1  plexin-B1 isoform X1

      See identical proteins and their annotated locations for XP_011532137.1

      Conserved Domains (8) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622103
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      cl26464
      Location:681839
      Atrophin-1; Atrophin-1 family
    3. XM_047448335.1XP_047304291.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    4. XM_011533836.2XP_011532138.1  plexin-B1 isoform X1

      See identical proteins and their annotated locations for XP_011532138.1

      Conserved Domains (8) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622103
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      cl26464
      Location:681839
      Atrophin-1; Atrophin-1 family
    5. XM_011533833.3XP_011532135.1  plexin-B1 isoform X1

      See identical proteins and their annotated locations for XP_011532135.1

      Conserved Domains (8) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622103
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      cl26464
      Location:681839
      Atrophin-1; Atrophin-1 family
    6. XM_047448331.1XP_047304287.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    7. XM_017006630.2XP_016862119.1  plexin-B1 isoform X1

      Conserved Domains (8) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622103
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      cl26464
      Location:681839
      Atrophin-1; Atrophin-1 family
    8. XM_047448332.1XP_047304288.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    9. XM_011533837.2XP_011532139.1  plexin-B1 isoform X1

      See identical proteins and their annotated locations for XP_011532139.1

      Conserved Domains (8) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622103
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      cl26464
      Location:681839
      Atrophin-1; Atrophin-1 family
    10. XM_011533834.2XP_011532136.1  plexin-B1 isoform X1

      See identical proteins and their annotated locations for XP_011532136.1

      Conserved Domains (8) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622103
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      cl26464
      Location:681839
      Atrophin-1; Atrophin-1 family
    11. XM_047448334.1XP_047304290.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    12. XM_047448330.1XP_047304286.1  plexin-B1 isoform X1

    13. XM_017006631.2XP_016862120.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
      Conserved Domains (10) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      PHA03247
      Location:681839
      PHA03247; large tegument protein UL36; Provisional
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622102
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      pfam17960
      Location:541627
      TIG_plexin; TIG domain
      pfam18020
      Location:9211020
      TIG_2; TIG domain found in plexin
    14. XM_024453600.2XP_024309368.1  plexin-B1 isoform X1

      Conserved Domains (8) summary
      cd11275
      Location:28480
      Sema_plexin_B1; The Sema domain, a protein interacting module, of Plexin B1
      smart00423
      Location:641677
      PSI; domain found in Plexins, Semaphorins and Integrins
      cd01179
      Location:11621249
      IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01180
      Location:10701161
      IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      cd01181
      Location:12521376
      IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
      pfam01437
      Location:481527
      PSI; Plexin repeat
      pfam08337
      Location:15622103
      Plexin_cytopl; Plexin cytoplasmic RasGAP domain
      cl26464
      Location:681839
      Atrophin-1; Atrophin-1 family
    15. XM_047448336.1XP_047304292.1  plexin-B1 isoform X3

    RNA

    1. XR_007095694.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      48431864..48458348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054346894.1XP_054202869.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    2. XM_054346890.1XP_054202865.1  plexin-B1 isoform X1

    3. XM_054346896.1XP_054202871.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    4. XM_054346891.1XP_054202866.1  plexin-B1 isoform X1

    5. XM_054346897.1XP_054202872.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    6. XM_054346885.1XP_054202860.1  plexin-B1 isoform X1

    7. XM_054346893.1XP_054202868.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    8. XM_054346887.1XP_054202862.1  plexin-B1 isoform X1

    9. XM_054346892.1XP_054202867.1  plexin-B1 isoform X1

    10. XM_054346886.1XP_054202861.1  plexin-B1 isoform X1

    11. XM_054346889.1XP_054202864.1  plexin-B1 isoform X1

    12. XM_054346888.1XP_054202863.1  plexin-B1 isoform X1

    13. XM_054346895.1XP_054202870.1  plexin-B1 isoform X2

      UniProtKB/Swiss-Prot
      A6H8Y2, O43157, Q6NY20, Q9UIV7, Q9UJ92, Q9UJ93
    14. XM_054346898.1XP_054202873.1  plexin-B1 isoform X3

    RNA

    1. XR_008486736.1 RNA Sequence