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    CG9356 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41122, updated on 10-May-2024

    Summary

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    Official Symbol
    CG9356provided by FlyBase
    Primary source
    FLYBASE:FBgn0037688
    Locus tag
    Dmel_CG9356
    See related
    AllianceGenome:FB:FBgn0037688
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG9356; Golgin-45
    Summary
    Predicted to be involved in Golgi organization and Golgi to plasma membrane protein transport. Predicted to be active in Golgi membrane. Orthologous to human BLZF1 (basic leucine zipper nuclear factor 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG9356 in Genome Data Viewer
    Location:
    85D15-85D15; 3-48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9402564..9404269, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5228286..5229991, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein L34b Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene BBSome interacting protein 1 Neighboring gene uncharacterized protein Neighboring gene beta-Tubulin at 85D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rab2 drives axonal transport of dense core vesicles and lysosomal organelles. Lund VK, et al. Cell Rep, 2021 Apr 13. PMID 33852866
    2. Correlation between desiccation stress response and epigenetic modifications of genes in Drosophila melanogaster: An example of environment-epigenome interaction. Sharma V, et al. Biochim Biophys Acta Gene Regul Mech, 2017 Oct. PMID 28801151
    3. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article
    4. Toward a comprehensive map of the effectors of rab GTPases. Gillingham AK, et al. Dev Cell, 2014 Nov 10. PMID 25453831, Free PMC Article
    5. Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster. Dunn JG, et al. Elife, 2013 Dec 3. PMID 24302569, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in Golgi to plasma membrane protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in Golgi to plasma membrane protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG9356-PA
    CG9356-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      9402564..9404269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141632.1 → NP_649889.1  uncharacterized protein Dmel_CG9356, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649889.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHE3
      Related
      FBpp0081525, FBtr0082047
      Conserved Domains (1) summary
      TIGR02168
      Location:156 → 333
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. NM_169278.3 → NP_731347.1  uncharacterized protein Dmel_CG9356, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731347.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHE3
      Related
      FBpp0081526
      Conserved Domains (1) summary
      TIGR02168
      Location:156 → 333
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VHE3 Q9VHE3

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