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    crygmxl2 crystallin, gamma MX, like 2 [ Danio rerio (zebrafish) ]

    Gene ID: 554132, updated on 27-Mar-2024

    Summary

    Official Symbol
    crygmxl2provided by ZNC
    Official Full Name
    crystallin, gamma MX, like 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050522-401
    See related
    Ensembl:ENSDARG00000074001 AllianceGenome:ZFIN:ZDB-GENE-050522-401
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    im:7140756; zgc:110021
    Summary
    Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens. Human ortholog(s) of this gene implicated in cataract; cataract 2 multiple types; cataract 39 multiple types; cataract 4 multiple types; and cataract 7. Orthologous to several human genes including CRYGA (crystallin gamma A); CRYGB (crystallin gamma B); and CRYGC (crystallin gamma C). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See crygmxl2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (30842677..30846055, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (30727775..30731153, complement)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase 18 family, member A1 Neighboring gene crystallin, gamma MX Neighboring gene uncharacterized LOC110440147 Neighboring gene transcription factor 7 like 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables structural constituent of eye lens IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in lens development in camera-type eye IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in visual perception IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    crystallin, gamma MX, like 2
    Names
    crygmxc
    crystallin gamma MXc

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024427.2NP_001019598.1  crystallin, gamma MX, like 2

      See identical proteins and their annotated locations for NP_001019598.1

      Status: VALIDATED

      Source sequence(s)
      BC095135, CN501051, CN506249
      UniProtKB/TrEMBL
      A0A8M1N6W1, Q4VBU2
      Related
      ENSDARP00000070462.4, ENSDART00000075983.6
      Conserved Domains (1) summary
      pfam00030
      Location:90171
      Crystall; Beta/Gamma crystallin

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      30842677..30846055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)