ung.L uracil DNA glycosylase L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ung.L
Official Full Name: uracil DNA glycosylase L homeolog
Primary source: Xenbase:XB-GENE-960124
Locus tag: XELAEV_18007455mg
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ung
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Genomic context

Location:: chromosome: 1L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (158327454..158336160, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (145353677..145362176, complement)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables uracil DNA N-glycosylase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within DNA repair	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within base-excision repair	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within base-excision repair, AP site formation via deaminated base removal	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uracil DNA glycosylase L homeolog

Names: uracil-DNA glycosylase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091943.1 → NP_001085412.1 uracil DNA glycosylase L homeolog

See identical proteins and their annotated locations for NP_001085412.1

Status: PROVISIONAL

Source sequence(s)

BC072313

UniProtKB/TrEMBL

A0A974I516, Q6ING8

Conserved Domains (1) summary

PRK05254
Location:85 → 301

PRK05254; uracil-DNA glycosylase; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

158327454..158336160 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041580028.1 → XP_041435962.1 uracil DNA glycosylase L homeolog isoform X1

UniProtKB/TrEMBL

A0A8J1M2P1, A0A974I516

Conserved Domains (2) summary

PRK05254
Location:94 → 310

PRK05254; uracil-DNA glycosylase; Provisional

cd10027
Location:152 → 156

UDG-F1-like; motif A [structural motif]