Cdr2 cerebellar degeneration-related protein 2 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Cdr2provided by RGD
Official Full Name: cerebellar degeneration-related protein 2provided by RGD
Primary source: RGD:1310578
See related: Ensembl:ENSRNOG00000017260 AllianceGenome:RGD:1310578
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1310578
Summary: Predicted to be located in cytoplasm. Orthologous to human CDR2 (cerebellar degeneration related protein 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Spleen (RPKM 255.4), Lung (RPKM 146.0) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 1q36

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (184934128..184959036, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (175502837..175527746, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (190889698..190914606, complement)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

the role of cdr2 in experimental models of Parkinson's disease, is reported.
Title: Proteolytic degradation and potential role of onconeural protein cdr2 in neurodegeneration.

Submit: New GeneRIF Correction

General gene information

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Markers

RH131568 (e-PCR)
- UniSTS:214851

RH130559 (e-PCR)
- UniSTS:213843

RH137436 (e-PCR)
- UniSTS:219524

AU049405 (e-PCR)
- UniSTS:145852

Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
located_in cytoplasm	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: cerebellar degeneration-related protein 2

Names: cerebellar degeneration-related 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.