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    LOC4339181 putative disease resistance protein RGA3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339181, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4339181
    Gene description
    putative disease resistance protein RGA3
    Locus tag
    OSNPB_050492600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    r13; YR48
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    Genomic context

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    See LOC4339181 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (24197065..24200695)

    Chromosome 5 - NC_029260.1Genomic Context describing neighboring genes Neighboring gene transcription factor TGAL1-like Neighboring gene disease resistance protein RGA2 Neighboring gene uncharacterized LOC4339180 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene uncharacterized LOC112939001

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029260.1 Chromosome 5 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to other organism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative disease resistance protein RGA3
    Names
    NBS-LRR type resistance protein
    NBS-LRR-like protein
    Os05g0492600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029260.1 Reference IRGSP-1.0 Primary Assembly

      Range
      24197065..24200695
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015784720.1 → XP_015640206.1  putative disease resistance protein RGA3

      UniProtKB/TrEMBL
      A0A0P0WP43, Q0DH44
      Conserved Domains (4) summary
      COG4886
      Location:556 → 627
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:522 → 544
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:173 → 418
      NB-ARC; NB-ARC domain
      pfam18052
      Location:11 → 93
      Rx_N; Rx N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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