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    LRFN2 leucine rich repeat and fibronectin type III domain containing 2 [ Gallus gallus (chicken) ]

    Gene ID: 428571, updated on 5-Mar-2024

    Summary

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    Symbol
    LRFN2provided by CGNC
    Full Name
    leucine rich repeat and fibronectin type III domain containing 2provided by CGNC
    Primary source
    CGNC:7641
    See related
    Ensembl:ENSGALG00010020095
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See LRFN2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (27921865..28068153)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (27847293..27993599)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene SPT7-like STAGA complex gamma subunit Neighboring gene solute carrier family 4 member 1 adaptor protein Neighboring gene uncharacterized LOC112532074 Neighboring gene uncharacterized LOC107052917 Neighboring gene uncharacterized LOC121110312 Neighboring gene uncharacterized LOC107052916 Neighboring gene molybdenum cofactor synthesis 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat and fibronectin type-III domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      27921865..28068153
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015283807.4 → XP_015139293.1  leucine-rich repeat and fibronectin type-III domain-containing protein 2

      UniProtKB/TrEMBL
      E1C6G2
      Related
      ENSGALP00010028625.1, ENSGALT00010048534.1
      Conserved Domains (6) summary
      smart00082
      Location:241 → 285
      LRRCT; Leucine rich repeat C-terminal domain
      COG4886
      Location:55 → 212
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:53 → 76
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00041
      Location:411 → 484
      fn3; Fibronectin type III domain
      pfam13855
      Location:124 → 184
      LRR_8; Leucine rich repeat
      cd05764
      Location:288 → 375
      IgI_SALM5_like; Immunoglobulin domain of human Synaptic Adhesion-Like Molecule 5 (SALM5) and similar proteins; member of the I-set of IgSF domains

    2. XM_046939307.1 → XP_046795263.1  leucine-rich repeat and fibronectin type-III domain-containing protein 2

      UniProtKB/TrEMBL
      E1C6G2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      27847293..27993599
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040667566.2 → XP_040523500.1  leucine-rich repeat and fibronectin type-III domain-containing protein 2

      UniProtKB/TrEMBL
      E1C6G2
      Conserved Domains (6) summary
      smart00082
      Location:241 → 285
      LRRCT; Leucine rich repeat C-terminal domain
      COG4886
      Location:55 → 212
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:53 → 76
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00041
      Location:411 → 484
      fn3; Fibronectin type III domain
      pfam13855
      Location:124 → 184
      LRR_8; Leucine rich repeat
      cd05764
      Location:288 → 375
      IgI_SALM5_like; Immunoglobulin domain of human Synaptic Adhesion-Like Molecule 5 (SALM5) and similar proteins; member of the I-set of IgSF domains

    2. XM_046914505.1 → XP_046770461.1  leucine-rich repeat and fibronectin type-III domain-containing protein 2

      UniProtKB/TrEMBL
      E1C6G2
    Nucleotide Protein
    Heading Accession and Version

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