rab35a RAB35, member RAS oncogene family a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rab35aprovided by ZNC
Official Full Name: RAB35, member RAS oncogene family aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-131030-1
See related: Ensembl:ENSDARG00000102078 AllianceGenome:ZFIN:ZDB-GENE-131030-1
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: rab35
Summary: Orthologous to human RAB35 (RAB35, member RAS oncogene family). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 5

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (2651414..2676360, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (2486003..2510698)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Rab8, Rab11, and Rab35 coordinate lumen and cilia formation during zebrafish left-right organizer development.
Title: Rab8, Rab11, and Rab35 coordinate lumen and cilia formation during zebrafish left-right organizer development.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ras-related protein Rab-35; ras-related protein Rab-35-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001386745.1 → NP_001373674.1 ras-related protein Rab-35

Status: VALIDATED

Source sequence(s)

CABZ01072548, CABZ01072549

UniProtKB/TrEMBL

A0A0G2L264, A0A8M1PRX4

Conserved Domains (1) summary

cl38936
Location:3 → 176

P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007116.7 Reference GRCz11 Primary Assembly

Range

2651414..2676360 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001334043.8 → XP_001334079.5 ras-related protein Rab-35-like

UniProtKB/TrEMBL

A0A0G2L264

Related

ENSDARP00000138829.1, ENSDART00000159661.2

Conserved Domains (1) summary

cl38936
Location:3 → 176

P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases