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    ccdc137 coiled-coil domain containing 137 [ Danio rerio (zebrafish) ]

    Gene ID: 767789, updated on 27-Mar-2024

    Summary

    Official Symbol
    ccdc137provided by ZNC
    Official Full Name
    coiled-coil domain containing 137provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060929-1206
    See related
    Ensembl:ENSDARG00000104024 AllianceGenome:ZFIN:ZDB-GENE-060929-1206
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb79h11; id:ibd1138; im:7139055; wu:fb79h11; zgc:153477
    Summary
    Predicted to be active in nucleus. Is expressed in immature eye; optic tectum; and paraxial mesoderm. Orthologous to human CCDC137 (coiled-coil domain containing 137). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
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    Genomic context

    See ccdc137 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (12893153..12903609, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (12741704..12752160, complement)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene si:ch211-8c17.3 Neighboring gene potassium inwardly rectifying channel subfamily J member 2b Neighboring gene BTB (POZ) domain containing 17b Neighboring gene platelet-derived growth factor alpha polypeptide b Neighboring gene protein kinase, cAMP-dependent, regulatory, type I, beta

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC153477

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 137

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076756.1NP_001070224.1  coiled-coil domain-containing protein 137

      See identical proteins and their annotated locations for NP_001070224.1

      Status: PROVISIONAL

      Source sequence(s)
      BC124364
      UniProtKB/TrEMBL
      Q08C68
      Related
      ENSDARP00000135401.1, ENSDART00000160522.2

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      12893153..12903609 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394521.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      70703..81159 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)