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    DNAAF1 dynein axonemal assembly factor 1 [ Gallus gallus (chicken) ]

    Gene ID: 415702, updated on 5-Mar-2024

    Summary

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    Symbol
    DNAAF1provided by CGNC
    Full Name
    dynein axonemal assembly factor 1provided by CGNC
    Primary source
    CGNC:2366
    See related
    Ensembl:ENSGALG00010024715
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    LRRC50
    Orthologs
    human mouse all
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    Genomic context

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    See DNAAF1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (2499298..2514191, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (2671895..2686789, complement)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene TNFRSF1A associated via death domain Neighboring gene F-box and leucine rich repeat protein 8 Neighboring gene heat shock transcription factor 4 Neighboring gene hydroxysteroid dehydrogenase like 1 Neighboring gene membrane bound transcription factor peptidase, site 1 Neighboring gene solute carrier family 38 member 8 Neighboring gene N-terminal EF-hand calcium binding protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dynein axonemal assembly factor 1
    Names
    leucine rich repeat containing 50

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001389554.1 → NP_001376483.1  dynein axonemal assembly factor 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000247
      UniProtKB/TrEMBL
      A0A8V1A3M6
      Related
      ENSGALP00010037089.1, ENSGALT00010060330.1
      Conserved Domains (2) summary
      sd00033
      Location:162 → 181
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:163 → 345
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2499298..2514191 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040707047.2 → XP_040562981.1  dynein axonemal assembly factor 1 isoform X1

      Conserved Domains (2) summary
      sd00033
      Location:160 → 179
      LRR_RI; leucine-rich repeat [structural motif]
      NF033188
      Location:153 → 319
      internalin_H; InlH/InlC2 family class 1 internalin

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2671895..2686789 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925446.1 → XP_046781402.1  dynein axonemal assembly factor 1 isoform X1

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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