U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    sre-48 Serpentine Receptor, class E (Epsilon) [ Caenorhabditis elegans ]

    Gene ID: 189762, updated on 12-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    sre-48
    Gene description
    Serpentine Receptor, class E (Epsilon)
    Locus tag
    CELE_Y39G8B.3
    See related
    AllianceGenome:WB:WBGene00012724
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See sre-48 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (13977164..13979883, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene NADP-dependent oxidoreductase domain-containing protein Neighboring gene NADP-dependent oxidoreductase domain-containing protein Neighboring gene ncRNA Neighboring gene ShKT domain-containing protein Neighboring gene ShKT domain-containing protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Serpentine Receptor, class E (Epsilon)
    NP_496927.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      13977164..13979883 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064526.1 → NP_496927.1  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496927.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2J4
      Conserved Domains (1) summary
      pfam03125
      Location:1 → 371
      Sre; C. elegans Sre G protein-coupled chemoreceptor
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools