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    srh-100 Serpentine Receptor, class H [ Caenorhabditis elegans ]

    Gene ID: 183511, updated on 12-Jun-2024

    Summary

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    Gene symbol
    srh-100
    Gene description
    Serpentine Receptor, class H
    Locus tag
    CELE_C46E10.10
    See related
    AllianceGenome:WB:WBGene00005319
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in ASIL; ASIR; ASJL; ASJR; and ventral ganglion. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See srh-100 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (3713188..3714695, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene 7TM GPCR serpentine receptor class x (Srx) domain-containing protein Neighboring gene F-box C protein Neighboring gene Serpentine Receptor, class H Neighboring gene F-box C protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNAi screen of DAF-16/FOXO target genes in C. elegans links pathogenesis and dauer formation. Jensen VL, et al. PLoS One, 2010 Dec 31. PMID 21209831, Free PMC Article
    2. High genetic diversity in the chemoreceptor superfamily of Caenorhabditis elegans. Stewart MK, et al. Genetics, 2005 Apr. PMID 15520260, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class H
    NP_494626.1
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      3713188..3714695 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062225.1 → NP_494626.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494626.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U5A4
      Conserved Domains (1) summary
      pfam10318
      Location:24 → 325
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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