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    cutl-17 PAN domain protein [ Caenorhabditis elegans ]

    Gene ID: 185474, updated on 23-Nov-2023

    Summary

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    Gene symbol
    cutl-17
    Gene description
    PAN domain protein
    Primary source
    WormBase:WBGene00009541
    Locus tag
    CELE_F38E11.4
    See related
    AllianceGenome:WB:WBGene00009541
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See cutl-17 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    15
    Sequence:
    Chromosome: IV; NC_003282.8 (9449125..9457500, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene SHSP domain-containing protein Neighboring gene SHSP domain-containing protein Neighboring gene ncRNA Neighboring gene Amidohydrolase-related domain-containing protein Neighboring gene ncRNA Neighboring gene putative coatomer subunit beta' Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PAN domain protein
    NP_001379101.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9449125..9457500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392369.1 → NP_001379101.1  PAN domain protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20167
      Conserved Domains (4) summary
      smart00473
      Location:208 → 295
      PAN_AP; divergent subfamily of APPLE domains
      cd01099
      Location:114 → 199
      PAN_AP_HGF; Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions ...
      pfam00024
      Location:26 → 106
      PAN_1; PAN domain
      cl27758
      Location:509 → 744
      Zona_pellucida; Zona pellucida-like domain
    Nucleotide Protein
    Heading Accession and Version

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