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    K09G1.1 MARVEL domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179346, updated on 5-May-2024

    Summary

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    Gene symbol
    K09G1.1
    Gene description
    MARVEL domain-containing protein
    Primary source
    WormBase:WBGene00010727
    Locus tag
    CELE_K09G1.1
    See related
    AllianceGenome:WB:WBGene00010727
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CMTM3 (CKLF like MARVEL transmembrane domain containing 3); CMTM5 (CKLF like MARVEL transmembrane domain containing 5); and CMTM7 (CKLF like MARVEL transmembrane domain containing 7). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See K09G1.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    9
    Sequence:
    Chromosome: V; NC_003283.11 (9583627..9590517)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serine/threonine-protein phosphatase Neighboring gene Uncharacterized protein Neighboring gene CTCK domain-containing protein Neighboring gene RNA polymerase-associated protein RTF1 homolog Neighboring gene Protein RER1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MARVEL domain-containing protein
    NP_001256124.1
    • Confirmed by transcript evidence
    NP_001256125.1
    • Partially confirmed by transcript evidence
    NP_001367179.1
    • Confirmed by transcript evidence
    NP_001379195.1
    • Confirmed by transcript evidence
    NP_001379281.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9583627..9590517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269195.3 → NP_001256124.1  MARVEL domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256124.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D9N146
      Conserved Domains (1) summary
      pfam01284
      Location:90 → 218
      MARVEL; Membrane-associating domain

    2. NM_001380730.1 → NP_001367179.1  MARVEL domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A9UJP1
      Conserved Domains (1) summary
      pfam01284
      Location:87 → 215
      MARVEL; Membrane-associating domain

    3. NM_001269196.3 → NP_001256125.1  MARVEL domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256125.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D9N147
      Conserved Domains (1) summary
      pfam01284
      Location:96 → 224
      MARVEL; Membrane-associating domain

    4. NM_001392579.1 → NP_001379281.1  MARVEL domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95ZR6
      Conserved Domains (1) summary
      pfam01284
      Location:49 → 177
      MARVEL; Membrane-associating domain

    5. NM_001392580.1 → NP_001379195.1  MARVEL domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XVL1
      Conserved Domains (1) summary
      pfam01284
      Location:61 → 189
      MARVEL; Membrane-associating domain
    Nucleotide Protein
    Heading Accession and Version

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