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    AT2G39850 Subtilisin-like serine endopeptidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818572, updated on 15-Oct-2023

    Summary

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    Gene symbol
    AT2G39850
    Gene description
    Subtilisin-like serine endopeptidase family protein
    Primary source
    Araport:AT2G39850
    Locus tag
    AT2G39850
    See related
    TAIR:AT2G39850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5I7.15; T5I7_15
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    Genomic context

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    See AT2G39850 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (16630411..16634253)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Translation initiation factor IF6 Neighboring gene DA1-related protein 2 Neighboring gene type one serine/threonine protein phosphatase 4 Neighboring gene Proteinase inhibitor, propeptide Neighboring gene plant/protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_129544.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Subtilisin-like serine endopeptidase family protein
    NP_565915.2
    • Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G46850.1); Has 4351 Blast hits to 3901 proteins in 675 species: Archae - 80; Bacteria - 1999; Metazoa - 45; Fungi - 97; Plants - 1948; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16630411..16634253
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129544.4 → NP_565915.2  Subtilisin-like serine endopeptidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565915.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IG09, Q8S8T2
      UniProtKB/TrEMBL
      A0A5S9X5J5
      Conserved Domains (3) summary
      COG1404
      Location:110 → 331
      AprE; Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones]
      pfam05922
      Location:29 → 106
      Inhibitor_I9; Peptidase inhibitor I9
      cl10459
      Location:103 → 584
      Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4IG09.1

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