U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MYCLP1 MYCL pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 4611, updated on 10-Oct-2023

    Summary

    Go to the top of the page Help
    Official Symbol
    MYCLP1provided by HGNC
    Official Full Name
    MYCL pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:7556
    See related
    MIM:310310; AllianceGenome:HGNC:7556
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MYCL2; L-MYC2; MYCL1P1; bHLHe38
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MYCLP1 in Genome Data Viewer
    Location:
    Xq22.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (107272464..107276556)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (105708864..105712925)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (106515694..106519786)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene nucleoporin 62 C-terminal like Neighboring gene GTF3C6 pseudogene 2 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:106399301-106399461 Neighboring gene dynein axonemal assembly factor 6 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:106598330-106599265 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:106607772-106608400 Neighboring gene DnaJ heat shock protein family (Hsp40) member A1 pseudogene 3 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:106640109-106640292 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20927 Neighboring gene keratin 18 pseudogene 49

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Phylogenetic analysis of the human basic helix-loop-helix proteins. Ledent V, et al. Genome Biol, 2002. PMID 12093377, Free PMC Article
    2. Mapping and characterization of an X-linked processed gene related to MYCL1. Morton CC, et al. Genomics, 1989 Apr. PMID 2541066
    3. Testis-specific expression of the human MYCL2 gene. Robertson NG, et al. Nucleic Acids Res, 1991 Jun 11. PMID 1711681, Free PMC Article
    4. Mapping of the MYCL2 processed gene to Xq22-23 and identification of an additional L MYC-related sequence in Xq27.2. Redolfi E, et al. FEBS Lett, 1999 Mar 12. PMID 10100857
    5. The human L-myc gene encodes multiple nuclear phosphoproteins from alternatively processed mRNAs. De Greve J, et al. Mol Cell Biol, 1988 Oct. PMID 3054516, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

    Go to the top of the page Help

    Markers

    Other Names

    • MYCL-related processed
    • v-myc avian myelocytomatosis viral oncogene homolog 1 pseudogene 1
    • v-myc avian myelocytomatosis viral oncogene homolog 2
    • v-myc myelocytomatosis viral oncogene homolog 1 pseudogene 1
    • v-myc myelocytomatosis viral oncogene homolog 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_009866.3 

      Range
      101..4193
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      107272464..107276556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      105708864..105712925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_005377.2: Suppressed sequence

      Description
      NM_005377.2: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Miscellaneous