zgc:162200 zgc:162200 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:162200provided by ZNC
Official Full Name: zgc:162200provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-2989
See related: Ensembl:ENSDARG00000079934 AllianceGenome:ZFIN:ZDB-GENE-030131-2989
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc23c10; wu:fc23c10; wu:fc80b03
Summary: Predicted to enable dynactin binding activity and dynein complex binding activity. Predicted to be involved in microtubule anchoring at microtubule organizing center; protein localization to organelle; and regulation of microtubule cytoskeleton organization. Predicted to be active in Golgi apparatus and cytosol. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 8

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (37059751..37105158, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (37027317..37072724, complement)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fc23c10.x1 (e-PCR)
- UniSTS:193144

fc23c10.x1 (e-PCR)
- UniSTS:187830

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables cytoskeletal anchor activity	IEA Inferred from Electronic Annotation more info
enables dynactin binding	IBA Inferred from Biological aspect of Ancestor more info
enables dynein complex binding	IBA Inferred from Biological aspect of Ancestor more info
enables dynein complex binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in microtubule anchoring at microtubule organizing center	IBA Inferred from Biological aspect of Ancestor more info
involved_in protein localization to organelle	IBA Inferred from Biological aspect of Ancestor more info
involved_in regulation of microtubule cytoskeleton organization	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in Golgi apparatus	IBA Inferred from Biological aspect of Ancestor more info
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC558638

Names: bicaudal D homolog 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.