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    TRIM65 tripartite motif containing 65 [ Gallus gallus (chicken) ]

    Gene ID: 417367, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TRIM65provided by CGNC
    Official Full Name
    tripartite motif containing 65provided by CGNC
    Primary source
    CGNC:66276
    See related
    Ensembl:ENSGALG00010029773
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRIM65 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (5251851..5255132)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (4855386..4858667)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA oxidase 1 Neighboring gene Fas binding factor 1 Neighboring gene mitochondrial ribosomal protein L38 Neighboring gene tripartite motif containing 47 Neighboring gene WW domain binding protein 2 Neighboring gene unc-13 homolog D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripartite motif-containing protein 65
    Names
    gene overexpressed in astrocytoma
    tripartite motif-containing 47

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5251851..5255132
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_415625.7 → XP_415625.3  tripartite motif-containing protein 65

      UniProtKB/TrEMBL
      A0A8V1AFB7
      Related
      ENSGALP00010044721.1, ENSGALT00010072031.1
      Conserved Domains (5) summary
      TIGR02168
      Location:141 → 243
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd12896
      Location:335 → 516
      SPRY_PRY_TRIM65; PRY/SPRY domain in tripartite motif-containing domain 65 (TRIM65)
      cd00162
      Location:15 → 62
      RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
      cl00034
      Location:101 → 142
      Bbox_SF; B-box-type zinc finger superfamily
      cl17238
      Location:13 → 63
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4855386..4858667
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040686271.2 → XP_040542205.1  tripartite motif-containing protein 65

      UniProtKB/TrEMBL
      A0A8V1AFB7
      Conserved Domains (5) summary
      TIGR02168
      Location:141 → 243
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd12896
      Location:338 → 519
      SPRY_PRY_TRIM65; PRY/SPRY domain in tripartite motif-containing domain 65 (TRIM65)
      cd00162
      Location:15 → 62
      RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
      cl00034
      Location:101 → 142
      Bbox_SF; B-box-type zinc finger superfamily
      cl17238
      Location:13 → 63
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein Strain
    Heading Accession and Version

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