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    RLTPR RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing [ Gallus gallus (chicken) ]

    Gene ID: 415666, updated on 5-Mar-2024

    Summary

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    Official Symbol
    RLTPRprovided by CGNC
    Official Full Name
    RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containingprovided by CGNC
    Primary source
    CGNC:1280
    See related
    Ensembl:ENSGALG00010022652
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C14orf121
    Orthologs
    human mouse all
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    Genomic context

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    See RLTPR in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (1161215..1178679)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (1333660..1351131)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 65 member A Neighboring gene uncharacterized LOC107052159 Neighboring gene CCCTC-binding factor Neighboring gene uncharacterized LOC100857820 Neighboring gene uncharacterized LOC101748539 Neighboring gene adrenocortical dysplasia homolog Neighboring gene alanyl-tRNA synthetase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    capping protein, Arp2/3 and myosin-I linker protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1161215..1178679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_414033.8 → XP_414033.5  capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZPC8, A0A8V0ZR63
      Related
      ENSGALP00010033334.1, ENSGALT00010055118.1
      Conserved Domains (2) summary
      sd00034
      Location:246 → 274
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl39015
      Location:219 → 345
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    2. XM_015279171.4 → XP_015134657.2  capping protein, Arp2/3 and myosin-I linker protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZR63
      Conserved Domains (2) summary
      sd00034
      Location:246 → 274
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl39015
      Location:219 → 345
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    3. XM_015279170.4 → XP_015134656.2  capping protein, Arp2/3 and myosin-I linker protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZR63
      Conserved Domains (2) summary
      sd00034
      Location:246 → 274
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl39015
      Location:219 → 345
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1333660..1351131
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040680892.2 → XP_040536826.1  capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZR63
      Conserved Domains (3) summary
      sd00033
      Location:511 → 572
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:246 → 274
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl39015
      Location:219 → 345
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    2. XM_040680894.2 → XP_040536828.1  capping protein, Arp2/3 and myosin-I linker protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZR63
      Conserved Domains (3) summary
      sd00033
      Location:511 → 572
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:246 → 274
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl39015
      Location:219 → 345
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    3. XM_040680893.2 → XP_040536827.1  capping protein, Arp2/3 and myosin-I linker protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZR63
      Conserved Domains (3) summary
      sd00033
      Location:511 → 572
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:246 → 274
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl39015
      Location:219 → 345
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    Nucleotide Protein Strain
    Heading Accession and Version

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