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    TRPC5 transient receptor potential cation channel subfamily C member 5 [ Gallus gallus (chicken) ]

    Gene ID: 422337, updated on 5-Mar-2024

    Summary

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    Symbol
    TRPC5provided by CGNC
    Full Name
    transient receptor potential cation channel subfamily C member 5provided by CGNC
    Primary source
    CGNC:6033
    See related
    Ensembl:ENSGALG00010013917
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRPC5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (13009510..13105744)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (13043666..13138744)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene angiomotin Neighboring gene uncharacterized LOC121110632 Neighboring gene ALG13, UDP-N-acetylglucosaminyltransferase subunit Neighboring gene serine rich and transmembrane domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inositol 1,4,5 trisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables store-operated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in manganese ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cation channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short transient receptor potential channel 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      13009510..13105744
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_420310.8 → XP_420310.3  short transient receptor potential channel 5

      UniProtKB/TrEMBL
      A0A8V0YFR1
      Related
      ENSGALP00010019683.1, ENSGALT00010033355.1
      Conserved Domains (2) summary
      TIGR00870
      Location:17 → 757
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:69 → 120
      ANK; ANK repeat [structural motif]

    2. XM_046940503.1 → XP_046796459.1  short transient receptor potential channel 5

      UniProtKB/TrEMBL
      A0A8V0YFR1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      13043666..13138744
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046917325.1 → XP_046773281.1  short transient receptor potential channel 5

      UniProtKB/TrEMBL
      A0A8V0YFR1

    2. XM_040670576.2 → XP_040526510.1  short transient receptor potential channel 5

      UniProtKB/TrEMBL
      A0A8V0YFR1
      Conserved Domains (2) summary
      TIGR00870
      Location:17 → 757
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:69 → 120
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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