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    tmem134 transmembrane protein 134 [ Danio rerio (zebrafish) ]

    Gene ID: 393340, updated on 27-Mar-2024

    Summary

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    Official Symbol
    tmem134provided by ZNC
    Official Full Name
    transmembrane protein 134provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1345
    See related
    Ensembl:ENSDARG00000024828 AllianceGenome:ZFIN:ZDB-GENE-040426-1345
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:64040
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system; notochord; and ventricular zone. Orthologous to human TMEM134 (transmembrane protein 134). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    See tmem134 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (39882541..39895913, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (39164468..39177702, complement)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene dCMP deaminase Neighboring gene interferon regulatory factor 2a Neighboring gene storkhead box 2a Neighboring gene uncharacterized LOC110439845 Neighboring gene inhibitor of growth family, member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC64040

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 134

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200369.1 → NP_956663.1  transmembrane protein 134

      See identical proteins and their annotated locations for NP_956663.1

      Status: PROVISIONAL

      Source sequence(s)
      BC053217
      UniProtKB/TrEMBL
      A0A8M1PH34, Q7T382
      Related
      ENSDARP00000033283.6, ENSDART00000035739.8
      Conserved Domains (1) summary
      pfam05915
      Location:68 → 204
      DUF872; Eukaryotic protein of unknown function (DUF872)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      39882541..39895913 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021466898.1 → XP_021322573.1  transmembrane protein 134 isoform X1

      UniProtKB/TrEMBL
      A0A8M9P8A4, B8JIT2
      Related
      ENSDARP00000116448.1, ENSDART00000135791.2
      Conserved Domains (1) summary
      pfam05915
      Location:68 → 189
      DUF872; Eukaryotic protein of unknown function (DUF872)
    Nucleotide Protein
    Heading Accession and Version

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