ubl7a ubiquitin-like 7a (bone marrow stromal cell-derived) [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ubl7aprovided by ZNC
Official Full Name: ubiquitin-like 7a (bone marrow stromal cell-derived)provided by ZNC
Primary source: ZFIN:ZDB-GENE-050417-285
See related: Ensembl:ENSDARG00000024229 AllianceGenome:ZFIN:ZDB-GENE-050417-285
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:112080
Summary: Predicted to enable polyubiquitin modification-dependent protein binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be active in cytosol. Orthologous to human UBL7 (ubiquitin like 7). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 25

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	25	NC_007136.7 (31743651..31763855, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	25	NC_007136.6 (31332690..31352894, complement)

Chromosome 25 - NC_007136.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables polyubiquitin modification-dependent protein binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in ubiquitin-dependent protein catabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: ubiquitin-like protein 7a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001017765.1 → NP_001017765.1 ubiquitin-like protein 7a

See identical proteins and their annotated locations for NP_001017765.1

Status: PROVISIONAL

Source sequence(s)

BC093190

UniProtKB/TrEMBL

Q567F6

Related

ENSDARP00000041739.6, ENSDART00000041740.7

Conserved Domains (3) summary

smart00213
Location:40 → 88

UBQ; Ubiquitin homologues

cd14326
Location:337 → 374

UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins

cl00155
Location:19 → 92

UBQ; Ubiquitin-like proteins