U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC440570 uncharacterized LOC440570 [ Homo sapiens (human) ]

    Gene ID: 440570, updated on 17-Jun-2024

    Summary

    Gene symbol
    LOC440570
    Gene description
    uncharacterized LOC440570
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LOC440570 in Genome Data Viewer
    Location:
    1p36.13
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 Unlocalized Scaffold NT_187368.1 (30201..33343, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (16452135..16455277)

    NT_187368.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene tRNA-Asn (anticodon GTT) 26-1 Neighboring gene transfer RNA glutamic acid (anticodon UUC)

    NW_025791756.1Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16992232-16993198 Neighboring gene RNA, U1 small nuclear 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16983417-16984225 Neighboring gene macrophage stimulating 1 pseudogene Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene uncharacterized LOC105379524 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene RNA, variant U1 small nuclear 18

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_135765.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC213203

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NT_187368.1 Reference GRCh38.p14 Primary Assembly

      Range
      30201..33343 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791756.1 Reference GRCh38.p14 PATCHES

      Range
      946488..949628
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      16452135..16455277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001013708.2: Suppressed sequence

      Description
      NM_001013708.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate, and because currently there is support for the transcript but not for the protein.