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    DCAF1 DDB1 and CUL4 associated factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700596, updated on 5-Mar-2024

    Summary

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    Official Symbol
    DCAF1provided by VGNC
    Official Full Name
    DDB1 and CUL4 associated factor 1provided by VGNC
    Primary source
    VGNC:VGNC:71819
    Locus tag
    EGK_11590
    See related
    Ensembl:ENSMMUG00000004280
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DCAF1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (107478182..107585554, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (90845845..90915501)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 15B Neighboring gene mesencephalic astrocyte derived neurotrophic factor Neighboring gene suppressyn-like Neighboring gene RAD54 like 2 Neighboring gene U6atac minor spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H2AT120 kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear estrogen receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cul4-RING E3 ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein VPRBP; DDB1- and CUL4-associated factor 1
    XP_028700011.1
    XP_028700012.1
    XP_028700013.1
    XP_028700014.1
    XP_028700015.1
    XP_028700016.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      107478182..107585554 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844178.1 → XP_028700011.1  DDB1- and CUL4-associated factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QK09, A0A1D5R114, F6ZM24, F6ZSI3
      Related
      ENSMMUP00000052790.2, ENSMMUT00000057225.2
      Conserved Domains (3) summary
      sd00039
      Location:1097 → 1133
      7WD40; WD40 repeat [structural motif]
      pfam15449
      Location:888 → 1047
      Retinal; Retinal protein
      cl29593
      Location:1093 → 1311
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_028844181.1 → XP_028700014.1  DDB1- and CUL4-associated factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QK09, A0A1D5R114, F6ZM24, F6ZSI3
      Conserved Domains (3) summary
      sd00039
      Location:1097 → 1133
      7WD40; WD40 repeat [structural motif]
      pfam15449
      Location:888 → 1047
      Retinal; Retinal protein
      cl29593
      Location:1093 → 1311
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_028844180.1 → XP_028700013.1  DDB1- and CUL4-associated factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QK09, A0A1D5R114, F6ZM24, F6ZSI3
      Conserved Domains (3) summary
      sd00039
      Location:1097 → 1133
      7WD40; WD40 repeat [structural motif]
      pfam15449
      Location:888 → 1047
      Retinal; Retinal protein
      cl29593
      Location:1093 → 1311
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_028844179.1 → XP_028700012.1  DDB1- and CUL4-associated factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QK09, A0A1D5R114, F6ZM24, F6ZSI3
      Related
      ENSMMUP00000053998.2, ENSMMUT00000056200.2
      Conserved Domains (3) summary
      sd00039
      Location:1097 → 1133
      7WD40; WD40 repeat [structural motif]
      pfam15449
      Location:888 → 1047
      Retinal; Retinal protein
      cl29593
      Location:1093 → 1311
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    5. XM_028844183.1 → XP_028700016.1  DDB1- and CUL4-associated factor 1 isoform X2

      UniProtKB/TrEMBL
      F6ZSI3
      Conserved Domains (3) summary
      sd00039
      Location:1015 → 1051
      7WD40; WD40 repeat [structural motif]
      pfam15449
      Location:806 → 965
      Retinal; Retinal protein
      cl29593
      Location:1011 → 1229
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    6. XM_028844182.1 → XP_028700015.1  DDB1- and CUL4-associated factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QK09, A0A1D5R114, F6ZM24, F6ZSI3
      Conserved Domains (3) summary
      sd00039
      Location:1097 → 1133
      7WD40; WD40 repeat [structural motif]
      pfam15449
      Location:888 → 1047
      Retinal; Retinal protein
      cl29593
      Location:1093 → 1311
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RNA

    1. XR_003727311.1 RNA Sequence

    2. XR_003727310.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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