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    SMOC1 SPARC related modular calcium binding 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712994, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SMOC1provided by VGNC
    Official Full Name
    SPARC related modular calcium binding 1provided by VGNC
    Primary source
    VGNC:VGNC:77745
    See related
    Ensembl:ENSMMUG00000017430
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SMOC1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (132024622..132175125)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (132100129..132250682)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA11 Neighboring gene solute carrier family 10 member 1 Neighboring gene solute carrier family 8 member A3 Neighboring gene disintegrin and metalloproteinase domain-containing protein 20-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables extracellular matrix binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heparin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in extracellular matrix organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basement membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SPARC-related modular calcium-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      132024622..132175125
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851625.1 → XP_028707458.1  SPARC-related modular calcium-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      G7MYJ2
      Conserved Domains (4) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      pfam16597
      Location:216 → 285
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
      cd16240
      Location:416 → 530
      EFh_SPARC_SMOC1; EF-hand, extracellular calcium-binding (EC) motif, found in secreted modular calcium-binding protein 1 (SMOC-1)
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat

    2. XM_028851626.1 → XP_028707459.1  SPARC-related modular calcium-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      G7MYJ2
      Conserved Domains (4) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      pfam16597
      Location:216 → 285
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
      cd16240
      Location:416 → 530
      EFh_SPARC_SMOC1; EF-hand, extracellular calcium-binding (EC) motif, found in secreted modular calcium-binding protein 1 (SMOC-1)
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat

    3. XM_028851627.1 → XP_028707460.1  SPARC-related modular calcium-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      G7MYJ2
      Conserved Domains (4) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      pfam16597
      Location:216 → 285
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
      cd16240
      Location:416 → 530
      EFh_SPARC_SMOC1; EF-hand, extracellular calcium-binding (EC) motif, found in secreted modular calcium-binding protein 1 (SMOC-1)
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat

    4. XM_028851629.1 → XP_028707462.1  SPARC-related modular calcium-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      G7MYJ2
      Conserved Domains (4) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      pfam16597
      Location:216 → 285
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
      cd16240
      Location:416 → 530
      EFh_SPARC_SMOC1; EF-hand, extracellular calcium-binding (EC) motif, found in secreted modular calcium-binding protein 1 (SMOC-1)
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat

    5. XM_015143979.2 → XP_014999465.1  SPARC-related modular calcium-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      G7MYJ2
      Conserved Domains (5) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      cd00191
      Location:294 → 360
      TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
      cd00252
      Location:432 → 493
      SPARC_EC; SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate ...
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat
      pfam16597
      Location:216 → 285
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain

    6. XM_015143983.2 → XP_014999469.1  SPARC-related modular calcium-binding protein 1 isoform X7

      UniProtKB/TrEMBL
      F7HPP5, G7MYJ2
      Related
      ENSMMUP00000022946.3, ENSMMUT00000024514.3
      Conserved Domains (5) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      cd00191
      Location:294 → 360
      TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
      cd00252
      Location:432 → 493
      SPARC_EC; SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate ...
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat
      pfam16597
      Location:216 → 285
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain

    7. XM_028851628.1 → XP_028707461.1  SPARC-related modular calcium-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      G7MYJ2
      Conserved Domains (4) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      pfam16597
      Location:216 → 274
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
      cd16240
      Location:405 → 519
      EFh_SPARC_SMOC1; EF-hand, extracellular calcium-binding (EC) motif, found in secreted modular calcium-binding protein 1 (SMOC-1)
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat

    8. XM_015143982.2 → XP_014999468.1  SPARC-related modular calcium-binding protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A1D5QP17, G7MYJ2
      Related
      ENSMMUP00000049794.2, ENSMMUT00000064949.2
      Conserved Domains (5) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      cd00191
      Location:283 → 349
      TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
      cd00252
      Location:421 → 482
      SPARC_EC; SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate ...
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat
      pfam16597
      Location:216 → 274
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain

    9. XM_001110348.4 → XP_001110348.2  SPARC-related modular calcium-binding protein 1 isoform X8

      See identical proteins and their annotated locations for XP_001110348.2

      UniProtKB/TrEMBL
      G7MYJ2
      Conserved Domains (5) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      cd00191
      Location:283 → 349
      TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
      cd00252
      Location:421 → 482
      SPARC_EC; SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate ...
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat
      pfam16597
      Location:216 → 274
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain

    10. XM_015143984.2 → XP_014999470.1  SPARC-related modular calcium-binding protein 1 isoform X9

      UniProtKB/TrEMBL
      G7MYJ2
      Related
      ENSMMUP00000049995.1, ENSMMUT00000059794.2
      Conserved Domains (5) summary
      cd00104
      Location:104 → 144
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      cd00191
      Location:283 → 349
      TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
      cd00252
      Location:421 → 482
      SPARC_EC; SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate ...
      pfam00086
      Location:152 → 215
      Thyroglobulin_1; Thyroglobulin type-1 repeat
      pfam16597
      Location:216 → 274
      Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
    Nucleotide Protein
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