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    Pgr15l G protein-coupled receptor 15-like [ Mus musculus (house mouse) ]

    Gene ID: 245526, updated on 11-Apr-2024

    Summary

    Official Symbol
    Pgr15lprovided by MGI
    Official Full Name
    G protein-coupled receptor 15-likeprovided by MGI
    Primary source
    MGI:MGI:2676330
    See related
    Ensembl:ENSMUSG00000031212 AllianceGenome:MGI:2676330
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Located in non-motile cilium. Is expressed in diencephalon lateral wall mantle layer and midbrain mantle layer. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Pgr15l in Genome Data Viewer
    Location:
    X C3; X 42.71 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (96116202..96125710)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (97072596..97082104)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 39527 Neighboring gene STARR-seq mESC enhancer starr_47587 Neighboring gene NSA2 ribosome biogenesis homolog pseudogene Neighboring gene STARR-seq mESC enhancer starr_47588 Neighboring gene STARR-seq mESC enhancer starr_47589 Neighboring gene heat shock protein 90, alpha (cytosolic), class A member 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47590 Neighboring gene STARR-seq mESC enhancer starr_47591 Neighboring gene ectodysplasin A2 receptor Neighboring gene Kruppel-like factor 17 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in non-motile cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    G protein-coupled receptor 15-like
    Names
    G protein-coupled receptor PGR15L

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033361.3NP_001028533.1  G protein-coupled receptor 15-like

      See identical proteins and their annotated locations for NP_001028533.1

      Status: VALIDATED

      Source sequence(s)
      AK136917, AK138339
      Consensus CDS
      CCDS30292.1
      UniProtKB/TrEMBL
      Q80T54
      Related
      ENSMUSP00000033556.4, ENSMUST00000033556.4
      Conserved Domains (2) summary
      pfam00001
      Location:89346
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:83360
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      96116202..96125710
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)