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    pqn-75 Basic proline-rich protein;Basic proline-rich protein-like;Prion-like-(Q/N-rich)-domain-bearing protein [ Caenorhabditis elegans ]

    Gene ID: 177165, updated on 25-Apr-2024

    Summary

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    Gene symbol
    pqn-75
    Gene description
    Basic proline-rich protein;Basic proline-rich protein-like;Prion-like-(Q/N-rich)-domain-bearing protein
    Primary source
    WormBase:WBGene00004157
    Locus tag
    CELE_W03D2.1
    See related
    AllianceGenome:WB:WBGene00004157
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in pharynx. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See pqn-75 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (4072327..4077645)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene ncRNA Neighboring gene Secreted protein Neighboring gene CUB domain-containing protein Neighboring gene Secreted protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PQN-75 is expressed in the pharyngeal gland cells of Caenorhabditiselegans and is dispensable for germline development. Rochester JD, et al. Biol Open, 2017 Sep 15. PMID 28916707, Free PMC Article
    2. Perinuclear P granules are the principal sites of mRNA export in adult C. elegans germ cells. Sheth U, et al. Development, 2010 Apr. PMID 20223759, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    General protein information

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    Preferred Names
    Basic proline-rich protein;Basic proline-rich protein-like;Prion-like-(Q/N-rich)-domain-bearing protein
    NP_001294405.1
    • Product from WormBase gene class pqn;
      Confirmed by transcript evidence
    NP_741365.1
    • Confirmed by transcript evidence
    NP_741366.1
    • Confirmed by transcript evidence
    NP_741367.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      4072327..4077645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171311.7 → NP_741365.1  Basic proline-rich protein-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741365.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ77
      Conserved Domains (1) summary
      PRK07764
      Location:325 → 513
      PRK07764; DNA polymerase III subunits gamma and tau; Validated

    2. NM_001307476.1 → NP_001294405.1  Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294405.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PBP8

    3. NM_171903.7 → NP_741367.1  Basic proline-rich protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741367.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MQG8
      Conserved Domains (1) summary
      PRK07764
      Location:319 → 507
      PRK07764; DNA polymerase III subunits gamma and tau; Validated

    4. NM_171312.6 → NP_741366.1  Basic proline-rich protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741366.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MQG9
      Conserved Domains (1) summary
      PRK07764
      Location:337 → 528
      PRK07764; DNA polymerase III subunits gamma and tau; Validated

    RNA

    1. NR_131466.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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