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    pipp-4P Phosphatidylinositol-4,5-bisphosphate 4-phosphatase [ Caenorhabditis elegans ]

    Gene ID: 190605, updated on 19-Jun-2024

    Summary

    Gene symbol
    pipp-4P
    Gene description
    Phosphatidylinositol-4,5-bisphosphate 4-phosphatase
    Locus tag
    CELE_Y71H2AM.2
    See related
    AllianceGenome:WB:WBGene00022167
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Predicted to be located in endosome membrane and lysosome. Predicted to be integral component of membrane. Predicted to be active in bounding membrane of organelle and plasma membrane. Orthologous to several human genes including PIP4P1 (phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See pipp-4P in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (2819278..2826588)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase E3D Neighboring gene Elongation factor Tu, mitochondrial Neighboring gene N(6)-L-threonylcarbamoyladenine synthase Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene Thioredoxin domain-containing protein 17

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in phosphatidylinositol dephosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phosphatidylinositol dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in late endosome membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in lysosomal membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in phagocytic vesicle membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Phosphatidylinositol-4,5-bisphosphate 4-phosphatase
    NP_001411904.1
    • Confirmed by transcript evidence
    NP_497624.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      2819278..2826588
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001424978.1NP_001411904.1  Phosphatidylinositol-4,5-bisphosphate 4-phosphatase [Caenorhabditis elegans]

      Status: REVIEWED

    2. NM_065223.6NP_497624.3  Phosphatidylinositol-4,5-bisphosphate 4-phosphatase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497624.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9BL29
      Conserved Domains (1) summary
      pfam09788
      Location:59217
      Tmemb_55A; Transmembrane protein 55A