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    cwf-19L2 CWF19-like protein 2 homolog;Cwf19-like protein C-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176034, updated on 12-Jun-2024

    Summary

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    Gene symbol
    cwf-19L2
    Gene description
    CWF19-like protein 2 homolog;Cwf19-like protein C-terminal domain-containing protein
    Locus tag
    CELE_B0361.2
    See related
    AllianceGenome:WB:WBGene00015156
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of post-mRNA release spliceosomal complex. Orthologous to human CWF19L2 (CWF19 like cell cycle control factor 2). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See cwf-19L2 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    10
    Sequence:
    Chromosome: III; NC_003281.10 (7293634..7308355)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene ACB domain-containing protein Neighboring gene LsmAD domain-containing protein;ZM domain-containing protein Neighboring gene Cation efflux protein cytoplasmic domain-containing protein Neighboring gene DUF19 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of post-mRNA release spliceosomal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    CWF19-like protein 2 homolog;Cwf19-like protein C-terminal domain-containing protein
    NP_001021125.1
    • Confirmed by transcript evidence
    NP_001021126.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      7293634..7308355
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001025954.7 → NP_001021125.1  CWF19-like protein 2 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021125.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q10945, Q10946
      Conserved Domains (2) summary
      pfam04676
      Location:359 → 451
      CwfJ_C_2; Protein similar to CwfJ C-terminus 2
      pfam04677
      Location:226 → 350
      CwfJ_C_1; Protein similar to CwfJ C-terminus 1

    2. NM_001025955.5 → NP_001021126.1  Cwf19-like protein C-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021126.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4TTD1
      Conserved Domains (1) summary
      pfam04676
      Location:2 → 90
      CwfJ_C_2; Protein similar to CwfJ C-terminus 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q10946.2

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