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    W09H1.3 Transthyretin-like family protein [ Caenorhabditis elegans ]

    Gene ID: 174962, updated on 12-Jun-2024

    Summary

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    Gene symbol
    W09H1.3
    Gene description
    Transthyretin-like family protein
    Locus tag
    CELE_W09H1.3
    See related
    AllianceGenome:WB:WBGene00012373
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in extracellular space. Orthologous to human C3orf33 (chromosome 3 open reading frame 33). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See W09H1.3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003280.10 (13184429..13185003)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DUF1902 domain-containing protein Neighboring gene Histone H2A/H2B/H3 domain-containing protein Neighboring gene Enoyl-[acyl-carrier-protein] reductase, mitochondrial Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Transthyretin-like family protein
    NP_496798.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      13184429..13185003
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064397.4 → NP_496798.1  Transthyretin-like family protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496798.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45901
    Nucleotide Protein
    Heading Accession and Version

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